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What gets installed where?
As operating systems have evolved, they have taken steps to separate programs/application files (that you presumably shouldn't touch) from "user data" such as saved games and custom files. For transparency, here is a breakdown of what files get installed where during an OOTP installation!

Program Files
Program or application files - those that are used to run the program, and should not be touched by users - are installed in the following directories:

OSInstall TypeProgram File Location
Windows 7DefaultProgram Files (x86)Out of the Park DevelopmentsOOTP Baseball
Windows 7CustomThe directory you chose during installation
Windows VistaDefaultProgram FilesOut of the Park DevelopmentsOOTP Baseball
Windows VistaCustomThe directory you chose during installation
Windows XPDefaultProgram FilesOut of the Park DevelopmentsOOTP Baseball
Windows XPCustomThe directory you chose during installation
MacintoshDefaultApplicationsOut of the Park DevelopmentsOOTP Baseball
MacintoshCustomThe directory you chose during installation
LinuxDefaultThe directory that the install file resided in at the time of installation. This can be any directory than you placed the installer into after downloading it.
LinuxCustomThe directory you chose during installation
User Data Files
User data files - those that are custom to the user, or can be customized - are installed in the following directories:

OSInstall TypeUser Data Location
Windows 7DefaultDocumentsOut of the Park DevelopmentsOOTP Baseball
Windows 7CustomThe directory you chose during installation
Windows VistaDefault?
Windows VistaCustomThe directory you chose during installation
Windows XPDefaultMy DocumentsOut of the Park DevelopmentsOOTP Baseball
Windows XPCustomThe directory you chose during installation
MacintoshDefaultDocumentsOut of the Park DevelopmentsOOTP Baseball
MacintoshCustomThe directory you chose during installation
LinuxDefault/home/(user name)/.Out of the Park Developments/OOTP Baseball/custdata
LinuxCustomThe directory you chose during installation
Configuration Files
OOTP also has a few special configuration files that aren't required for normal usage of the game. These are placed in the following directory, which is hidden by default on all operating systems:

OSInstall TypeConfig File Location
Windows 7AnyUsers(username)AppDataRoamingOut of the Park DevelopmentsOOTP Baseballconfig
Windows VistaAnyUsers(username)AppDataRoamingOut of the Park DevelopmentsOOTP Baseball
Windows XPAnyDocuments and Settings(username)Application DataOut of the Park DevelopmentsOOTP Baseballconfig
MacintoshAny~/.Out of the Park Developments/OOTP Baseball/config
LinuxAny/home/(user name)/.Out of the Park Developments/OOTP Baseball/data/config/